VPlants Stat_tool documentation

Module description

Summary

Version:0.9.0 Release:0.9 Date:juillet 01, 2011 Author:See Authors section ChangeLog:See ChangeLog section

Overview

VPlants.Stat_Tool is a package containing basic statistic functions and classes.

Documentation

• 1. User Guide
  • 1.1. From original AML documentation
  • 1.2. tutorials and examples
  • 1.3. VisuAlea dataflow
• 2. Reference Guide
  • 2.1. Data structures
  • 2.2. Functionalities
  • 2.3. Display and Plot functionalities
  • 2.4. Others
• 3. Administration
  • 3.1. Methodologie Ecriture wrapper Python
  • 3.2. TODO
  • 3.3. Test

• A PDF version of VPlants.Stat_tool documentation is available.

See also

More documentation can be found on the openalea wiki.

Authors

Yann Guédon (Original code ; Cpp version; documentation)

Thomas Cokelaer (Boost python wrapping, python modules, tests, documentation)

ChangeLog

Stat_tool 0.9.0

version 9815

• function renaming:

  • ParametricModel to DiscreteParametricModel
  • MultivariateMixture replaces Mv_Mixture
  • DisctributionData into Discretedistriburtiondata
  • new class histogram

• new classes

  • marginal histograms
  • MVMixture objects
  • New Vectors constructor for MTG interface
  • Clustering and entropy withMultivariateMixture models.
  • Continuous parametric distributions (Gaussian, von Mises)
  • Observation process built from continuous parametric distributions
  • Introduction of ContinuousParametricProcess

• plotting in pylab is now fully available (stat_tool and sequence_analysis)

• Display is fully implemented as in old AML version.

• remove dependencies to sequence_analysis package

• move some data from test/data to /share/data

• move demos into sequence_analysis since there are dependencies on this package

• doc online: http://openalea.gforge.inria.fr/doc/vplants/stat_tool/doc/_build/html/contents.html

Stat_tool 0.8.5

• Finalisation of Boost python wrapping; fix some bugs
• Completion of the tests in ./test
• all pylab/matplotlib plots are now available
• add demos in VisuAlea (put in sequence_analysis package)

Stat_tool 0.7.0

• Major update adding most of the AMl functionalities, tests and plot using matplotlib interface on the 3d of August 2009

• finalise wrapping of the stat_tool cpp code with boost_python

• finalise Python interface a la AML (same syntax as AML code)

• sphinx documentation:

  • user guide
  • reference guide
  • administration guide
  • tutorials.

• add exhaustive unitary tests in ./test (coverage>80%)

• add functional tests

• move graphical interface to matplotlib

release 0.6.2

License

VPlants.Stat_tool is released under a Cecill-C License.

Note

Cecill-C license is a LGPL compatible license.